Teaching resources
Workbook on simulation-based population genetics
In addition to the individual lectures and practical sessions presented below, I’ve been writing a workbook for an upcoming 2-3 weeks course on simulation-based population genetics and statistical inference. This book originally started from individual teaching materials, but it now contains much more than that. If you’re curious, take a look at the current version of the course available here:
bodkan.net/simgen
Individual lectures and workshops
Note: This section is still a work-in-progress. I’m currently going through my teaching archive and uploading or linking relevant information here. If a resource you’d like to see is missing, please get in touch!
(That said, given that most of my individual lectures over the past couple of years revolved around simulation-based population genomics, you might find that the workbook linked above is a more complete reference.)
2026
“Archaic human introgression”
Lecture and exercises for the Population genetics course at the University of Copenhagen, February 2026
- slides (PDF download)
- exercises and scripts (GitHub)
2025
“Building intuition into population genetic fundamentals and inference”
Practical activity session the Workshop on Population and Speciation Genomics in Český Krumlov, January 2025
- slides and practical exercises (GitHub)
“Archaic human introgression”
Lecture and exercises for the Population genetics course at the University of Copenhagen, February 2025
- slides (PDF download)
- exercises and scripts (GitHub)
2024
“Archaic human introgression”
Lecture and exercises for the Population genetics course at the University of Copenhagen, February 2024
- slides (PDF download)
- exercises and scripts (GitHub)
2023
“slendr simulations”
Two day workshop at MPI EVA Leipzig, February 2023
- source code, slides, exercises (GitHub)
“Simulations in population genetics”
Lecture and exercises for the Summer course in analysis of high throughput data for population genetics, University of Copenhagen, August 2023
- source code, slides, exercises (GitHub)
2022
“Simulations in population genetics”
Lecture and exercises for the Summer course in analysis of high throughput data for population genetics, University of Copenhagen, August 2022
- source code, slides, exercises (GitHub)
2021
“admixr workshop”
Online workshop for graduate students of ANTH 895: Methods and Research in Molecular Anthropology I, Yale University, March 2021
- slides (PDF download)
- source code and examples