Print the full log output of an admixr wrapper to the console.

Usage

loginfo(x, target = NA, save = FALSE, prefix = NA, dir = ".", suffix = ".txt")

Arguments

x: Output from one of the admixr wrappers (d, f4, qpAdm, ...)
target: A specific log to examine (relevant for multiple target qpAdm runs)
save: Save the log output to a disk?
prefix: Prefix of the output log file(s) (name of the admixr command by default)
dir: In which directory to save the log file(s)?
suffix: Suffix of the output log file(s) (".txt" by default)

Examples

if (FALSE) # download an example genomic data set and prepare it for analysis
snps <- eigenstrat(download_data(dirname = tempdir()))

# define a set of populations to analyze and calculate a D statistic
pops <- c("French", "Sardinian", "Han", "Papuan", "Khomani_San", "Mbuti", "Dinka")
result_d <- d(
    W = pops, X = "Yoruba", Y = "Vindija", Z = "Chimp",
    data = snps
)
#> Error: object 'snps' not found

# examine the full log output associated with the returned object
loginfo(result_d)
#> Error: object 'result_d' not found
 # \dontrun{}